1. Wu HC, Chen TN, Kao SH, Shui HA, Chen WJ, Lin HJ and Chen HM (2010). IEF management: an investigation for salt interference and an algorithm for optimization. Journal of Proteome Research, accepted. (SCI)

2. Wu HC, Yen CC, Tsui WH and Chen HM (2010). A red line not to cross: Evaluating the limitation and properness of gel image tuning procedures. Analytical Biochemistry. 396(1):42-50. (SCI) 

3. Chen YS, Wu HC, Liu CH, Chen HC and Yanagida F (2010). Isolation and characterization of lactic acid bacteria from Jiang-sun (fermented bamboo shoots), a traditional fermented food in Taiwan. Journal of the Science of Food and Agriculture. 90(12),1977-82. (SCI) First Author, equal contribution

4. Chen YS, Wu HC, and Yanagida F (2010). Isolation and characteristics of lactic acid bacteria isolated from ripe mulberries in Taiwan. Brazilian Journal of Microbiolog 41, 916-921. (SCI) First Author, equal contribution

5. Wu HC (2010). Electron acceptors and genes: How Escherichia coli adapt to changing environments. Ming-Chuan Health Tech Journal, Minireview - Biotechnology & Biological Science 1(e1), 1-6.

6. 康郁婷、吳慧中 (2006)。台灣傷口護理敷材的發展現況。化工資訊與商情，40，48-53。 

7. 吳慧中 (2006)。生物資源在化工產業之應用發展。化工資訊與商情，33，18-23。

8.  Shih YP, Wu HC, Wang TF and Wang AH (2005).Self-cleavage of fusion protein in vivo using TEV protease to yield native protein. Protein Science. 14(4),936-41.(SCI) First Author, equal contribution

9. Stewart V, Chen LL and Wu HC. (2003) Response to culture aeration mediated by the nitrate and nitrite sensor NarQ of Escherichia coli K-12. Molecular Microbiology. 50(4), 1391-9.

10. James AT, Wu HC, Braunthal N and Azarani A. (2003) A study of a high-throughput plasmid DNA purification system. Journal of the Association for Laboratory Automation. 8(3), 36-39.

11. Wu HC, Nguyen R, Goldsborough M, Margalit I, Breed C and Azarani A. (2003) A demonstration of high-throughput electrophoresis. Journal of the Association for Laboratory Automation. 8(1), 28-30.

12. Wu HC, Shieh J, Wright D and Azarani A. (2003) DNA Sequencing Using Rolling Circle Amplification and Precision Glass Syringes in a High-Throughput liquid handling system. BioTechniques. 34(1), 204-207.

13. Azarani A, Carramao J, Wu HC and Wright D. (2002) High-Throughput Plasmid DNA Purification. Genomics and Proteomics. 2(3), 51.

14. Nguyen R, Wu HC, Manbeian J and Azarani A. (2002) High-throughput electrophoresis using automated liquid handling microdispensers. American Biotechnology Laboratory. 20(7), 38.

15. Nguyen R, Wu HC, Azarani A, Goldsborough M, Margalit I and Breed C. (2002) High-throughput electrophoresis using the Tango automated liquid handling system and the E-Gel 96 system. Focus (http://www.invitrogen.com). 24(2), 3-4.

16. Hrupka H, Rupp B, Segelke B, Lekin T, Wright D, Wu HC, Todd P and Azarani A. (2002) The high-speed Hydra-Plus-One system for automated high-throughput protein crystallography. Acta Crystallographica. D58, 1523-1526.(SCI)

17. Shieh J, To C, Carramao J, Nishimura N, Maruta Y, Hashimoto Y, Wright D, Wu HC and Azarani A. (2002) High-throughput array production using precision glass syringes. BioTechniques. 32(6),1360-1365.(SCI)

18. Wu HC, Tyson K, Cole J and Busby S. (1998) Regulation of the E. coli nir operon promoter by two transcription factors: a new mechanism to account for co-dependence on two activators. Molecular Microbiology. 27(2),493-505.(SCI)

19. Li B, Wing H, Lee D, Wu HC and Busby S. (1998) Transcription activation by Escherichia coli FNR protein: similarities to, and differences from, the CRP paradigm. Nucleic Acids Research. 1; 26(9), 2075-81.